Eukaryotic Genetics

Fall 2009

Instructor: Michael Tibbetts (e-mail & Schedule)

Texts

Required - Genetics: Analysis of Genes and Genomes, 6th edition. D.L. Hartl and E.W. Jones. Jones and Bartlett Publishers Inc. © 2004. ISBN: 0763715115

Exams

There will be a mid-term and final exam (not cumulative) each worth 20% of the final grade (A prior year's exam).  The exams will be on October 21  and December 16Exams will not be given after their scheduled date! No excuses!

Laboratory

30% of the final grade will be based upon laboratory performance, which will be assessed by participation, success and the lab report.

Papers

20% of your grade will be based upon two papers. The first paper is due on October 16.  It will be an exposition of Choi SK, Yoon SR, Calabrese P, Arnheim N. A germ-line-selective advantage rather than an increased mutation rate can explain some unexpectedly common human disease mutations. Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):10143-8., which we will discuss in class well before the paper is due.  Assume that you are trying to explain the article to a genetics classmate.  In other words assume the reader has the same level of background as you.  The second paper, due on December 18, will be an exposition of an original research article that you chose.  Again, assume that you are trying to explain it to a genetics classmate.  You can pick a paper from any source you like, but check out the article you choose with me before beginning to write - hand the original article in with your paper. You have on-line access to Trends in Genetics, Trends in Biochemical Sciences and Current Opinion in Genetics & Development.  In addition, the library has a print subscription to Annual Review of Genetics and the department has Nature Reviews Genetics in my officeYou can browse these periodicals, which are full of nice reviews on genetic topics.  They are a good place to start when looking for an interesting and significant research article because they will have references for such articles and they will place the articles in a broader scientific context.  You must however, write your paper on a research article with real data not a review article. Your charge is to convince me that you understand the article. And yes, spelling and grammar count. 

Class Assignments

The final 10% of your grade will be based on various class assigments you will be given over the course of the semester.

Review reading

You are expected to come to this course with a prior understanding of the major concepts of Mendelian Genetics - equal segregation and independent assortment.  The library is full of introductory biology texts and genetics texts where you can read about these topics.  Free on-line versions of An Introduction to Genetic Analysis. 7th ed. Griffiths, A., et al. W. H. Freeman & © 1999 and Modern Genetic Analysis. Griffiths, A., et al. W. H. Freeman & © 1999 are maintained by the National Library of Medicine, and you should feel free to use these resources.  You should also be familiar with the topics covered in Chapter 1 sections 1.2 - 1.5 and Chapter 2 section 2.2 of Hartl & Jones.



Course Outline

 


 Sequence Complexity

Lecture Images

Mutation & Repair

Lecture Images

Recombination

Lecture Images

Mendel & Meiosis

Lecture Images
Horsetail movie

Chromosome Organization

Lecture Images
Mouse Human Comparative Map

Genotype - Phenotype

Lecture images

Quantitative Genetics

Lecture Images

Genes and Evolution

Lecture Images

Mapping Complex Traits